use GLMakie to make it interactive.

set values, which are same for every agent as model parameters, so they can be changed in interactive app
main
Michael Brehm 2024-05-29 15:59:09 +02:00
parent 42f79b0026
commit 1b59ad2fc9
4 changed files with 148 additions and 844 deletions

1
.gitignore vendored
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@ -38,3 +38,4 @@ ipython_config.py
# Remove previous ipynb_checkpoints
# git rm -r .ipynb_checkpoints/
#env/

5
env/Project.toml vendored 100644
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@ -0,0 +1,5 @@
[deps]
Agents = "46ada45e-f475-11e8-01d0-f70cc89e6671"
AgentsExampleZoo = "88acaeb2-2f63-4ada-bca2-2825d9da22ed"
CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0"
GLMakie = "e9467ef8-e4e7-5192-8a1a-b1aee30e663a"

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@ -46,7 +46,6 @@
# example, we could have only one type and one additional filed to separate them.
# Nevertheless, for the sake of example, we will use two different types.)
using Agents, Random
using CairoMakie
@agent struct Sheep(GridAgent{2})
energy::Float64
reproduction_prob::Float64
@ -58,7 +57,7 @@ using CairoMakie
#endurance::Float64
end
function perceive!(sheep::Sheep,model)
sheep.nearby_agents = nearby_agents(sheep, model, sheep.perception)
sheep.nearby_agents = nearby_agents(sheep, model, model.sheep_perception)#sheep.perception)
sheep.nearby_grass = nearby_fully_grown(sheep, model)
end
function move!(sheep::Sheep,model)
@ -76,17 +75,27 @@ function move!(sheep::Sheep,model)
end
function eat!(sheep::Sheep, model)
if model.fully_grown[sheep.pos...]
sheep.energy += sheep.Δenergy
sheep.energy += model.Δenergy_sheep#sheep.Δenergy
model.fully_grown[sheep.pos...] = false
end
return
end
function reproduce!(sheep::Sheep, model)
if rand(abmrng(model)) sheep.reproduction_prob
print(model.sheep_reproduce)
if rand(abmrng(model)) model.sheep_reproduce#sheep.reproduction_prob
sheep.energy /= 2
replicate!(sheep, model)
end
end
function Agents.agent2string(agent::Sheep)
"""
Sheep
ID = $(agent.id)
energy = $(agent.energy)
"""
end
function move_away!(agent, pos, model)
direction = agent.pos .- pos
direction = clamp.(direction,-1,1)
@ -122,7 +131,7 @@ end
#endurance::Float64
end
function perceive!(wolf::Wolf,model)
wolf.nearby_agents = nearby_agents(wolf, model, wolf.perception)
wolf.nearby_agents = nearby_agents(wolf, model, model.wolf_perception)#wolf.perception)
end
function move!(wolf::Wolf,model)
sheeps = filter(x -> isa(x, Sheep), collect(wolf.nearby_agents))
@ -138,16 +147,24 @@ function eat!(wolf::Wolf, model)
dinner = first_sheep_in_position(wolf.pos, model)
if !isnothing(dinner)
remove_agent!(dinner, model)
wolf.energy += wolf.Δenergy
wolf.energy += model.Δenergy_wolf#wolf.Δenergy
end
end
function reproduce!(wolf::Wolf, model)
if rand(abmrng(model)) wolf.reproduction_prob
if rand(abmrng(model)) model.wolf_reproduce#wolf.reproduction_prob
wolf.energy /= 2
replicate!(wolf, model)
end
end
function Agents.agent2string(agent::Wolf)
"""
Wolf
ID = $(agent.id)
energy = $(agent.energy)
"""
end
function first_sheep_in_position(pos, model)
ids = ids_in_position(pos, model)
j = findfirst(id -> model[id] isa Sheep, ids)
@ -168,18 +185,26 @@ function initialize_model(;
Δenergy_wolf = 20,
sheep_reproduce = 0.04,
wolf_reproduce = 0.05,
sheep_perception = 0,
wolf_perception = 0,
seed = 23182,
)
rng = MersenneTwister(seed)
space = GridSpace(dims, periodic = true)
## Model properties contain the grass as two arrays: whether it is fully grown
## and the time to regrow. Also have static parameter `regrowth_time`.
## Notice how the properties are a `NamedTuple` to ensure type stability.
properties = (
fully_grown = falses(dims),
countdown = zeros(Int, dims),
regrowth_time = regrowth_time,
## define as dictionary(mutable) instead of tuples(immutable) as per https://github.com/JuliaDynamics/Agents.jl/issues/727
properties = Dict(
:fully_grown => falses(dims),
:countdown => zeros(Int, dims),
:regrowth_time => regrowth_time,
:Δenergy_sheep => Δenergy_sheep,
:Δenergy_wolf => Δenergy_wolf,
:sheep_reproduce => sheep_reproduce,
:wolf_reproduce => wolf_reproduce,
:sheep_perception => sheep_perception,
:wolf_perception => wolf_perception
)
model = StandardABM(Union{Sheep, Wolf}, space;
agent_step! = sheepwolf_step!, model_step! = grass_step!,
@ -188,11 +213,11 @@ function initialize_model(;
## Add agents
for _ in 1:n_sheep
energy = rand(abmrng(model), 1:(Δenergy_sheep*2)) - 1
add_agent!(Sheep, model, energy, sheep_reproduce, Δenergy_sheep, 3, [], [])
add_agent!(Sheep, model, energy, sheep_reproduce, Δenergy_sheep, sheep_perception, [], [])
end
for _ in 1:n_wolves
energy = rand(abmrng(model), 1:(Δenergy_wolf*2)) - 1
add_agent!(Wolf, model, energy, wolf_reproduce, Δenergy_wolf, 1, [])
add_agent!(Wolf, model, energy, wolf_reproduce, Δenergy_wolf, wolf_perception, [])
end
## Add grass with random initial growth
for p in positions(model)

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@ -2,843 +2,75 @@
"cells": [
{
"cell_type": "code",
"execution_count": 5,
"execution_count": 2,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
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" \u001b[90m[86223c79] \u001b[39m\u001b[92m+ Graphs v1.11.0\u001b[39m\n",
" \u001b[90m[cd3eb016] \u001b[39m\u001b[92m+ HTTP v1.10.8\u001b[39m\n",
" \u001b[90m[34004b35] \u001b[39m\u001b[92m+ HypergeometricFunctions v0.3.23\u001b[39m\n",
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" \u001b[90m[682c06a0] \u001b[39m\u001b[92m+ JSON v0.21.4\u001b[39m\n",
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" \u001b[90m[1914dd2f] \u001b[39m\u001b[92m+ MacroTools v0.5.13\u001b[39m\n",
" \u001b[90m[739be429] \u001b[39m\u001b[92m+ MbedTLS v1.1.9\u001b[39m\n",
" \u001b[90m[626554b9] \u001b[39m\u001b[92m+ MetaGraphs v0.7.2\u001b[39m\n",
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" \u001b[90m[b8a86587] \u001b[39m\u001b[92m+ NearestNeighbors v0.4.16\u001b[39m\n",
" \u001b[90m[4d8831e6] \u001b[39m\u001b[92m+ OpenSSL v1.4.3\u001b[39m\n",
" \u001b[90m[bac558e1] \u001b[39m\u001b[92m+ OrderedCollections v1.6.3\u001b[39m\n",
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" \u001b[90m[d96e819e] \u001b[39m\u001b[92m+ Parameters v0.12.3\u001b[39m\n",
" \u001b[90m[69de0a69] \u001b[39m\u001b[92m+ Parsers v2.8.1\u001b[39m\n",
" \u001b[90m[2dfb63ee] \u001b[39m\u001b[92m+ PooledArrays v1.4.3\u001b[39m\n",
" \u001b[90m[aea7be01] \u001b[39m\u001b[92m+ PrecompileTools v1.2.1\u001b[39m\n",
" \u001b[90m[21216c6a] \u001b[39m\u001b[92m+ Preferences v1.4.3\u001b[39m\n",
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" \u001b[90m[94ee1d12] \u001b[39m\u001b[92m+ Quaternions v0.7.6\u001b[39m\n",
"\u001b[33m⌅\u001b[39m \u001b[90m[30b38841] \u001b[39m\u001b[92m+ QuickHeaps v0.1.2\u001b[39m\n",
" \u001b[90m[c1ae055f] \u001b[39m\u001b[92m+ RealDot v0.1.0\u001b[39m\n",
" \u001b[90m[189a3867] \u001b[39m\u001b[92m+ Reexport v1.2.2\u001b[39m\n",
" \u001b[90m[ae029012] \u001b[39m\u001b[92m+ Requires v1.3.0\u001b[39m\n",
" \u001b[90m[79098fc4] \u001b[39m\u001b[92m+ Rmath v0.7.1\u001b[39m\n",
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" \u001b[90m[91c51154] \u001b[39m\u001b[92m+ SentinelArrays v1.4.2\u001b[39m\n",
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" \u001b[90m[47aef6b3] \u001b[39m\u001b[92m+ SimpleWeightedGraphs v1.4.0\u001b[39m\n",
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" \u001b[90m[3783bdb8] \u001b[39m\u001b[92m+ TableTraits v1.0.1\u001b[39m\n",
" \u001b[90m[bd369af6] \u001b[39m\u001b[92m+ Tables v1.11.1\u001b[39m\n",
" \u001b[90m[3bb67fe8] \u001b[39m\u001b[92m+ TranscodingStreams v0.10.8\u001b[39m\n",
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" \u001b[90m[458c3c95] \u001b[39m\u001b[92m+ OpenSSL_jll v3.0.13+1\u001b[39m\n",
" \u001b[90m[efe28fd5] \u001b[39m\u001b[92m+ OpenSpecFun_jll v0.5.5+0\u001b[39m\n",
" \u001b[90m[f50d1b31] \u001b[39m\u001b[92m+ Rmath_jll v0.4.0+0\u001b[39m\n",
" \u001b[90m[02c8fc9c] \u001b[39m\u001b[92m+ XML2_jll v2.12.6+0\u001b[39m\n",
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" \u001b[90m[2a0f44e3] \u001b[39m\u001b[92m+ Base64\u001b[39m\n",
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" \u001b[90m[f43a241f] \u001b[39m\u001b[92m+ Downloads v1.6.0\u001b[39m\n",
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" \u001b[90m[3fa0cd96] \u001b[39m\u001b[92m+ REPL\u001b[39m\n",
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" \u001b[90m[ea8e919c] \u001b[39m\u001b[92m+ SHA v0.7.0\u001b[39m\n",
" \u001b[90m[9e88b42a] \u001b[39m\u001b[92m+ Serialization\u001b[39m\n",
" \u001b[90m[1a1011a3] \u001b[39m\u001b[92m+ SharedArrays\u001b[39m\n",
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" \u001b[90m[8dfed614] \u001b[39m\u001b[92m+ Test\u001b[39m\n",
" \u001b[90m[cf7118a7] \u001b[39m\u001b[92m+ UUIDs\u001b[39m\n",
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" \u001b[90m[e66e0078] \u001b[39m\u001b[92m+ CompilerSupportLibraries_jll v1.1.1+0\u001b[39m\n",
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" \u001b[90m[29816b5a] \u001b[39m\u001b[92m+ LibSSH2_jll v1.11.0+1\u001b[39m\n",
" \u001b[90m[c8ffd9c3] \u001b[39m\u001b[92m+ MbedTLS_jll v2.28.2+1\u001b[39m\n",
" \u001b[90m[14a3606d] \u001b[39m\u001b[92m+ MozillaCACerts_jll v2023.1.10\u001b[39m\n",
" \u001b[90m[4536629a] \u001b[39m\u001b[92m+ OpenBLAS_jll v0.3.23+4\u001b[39m\n",
" \u001b[90m[05823500] \u001b[39m\u001b[92m+ OpenLibm_jll v0.8.1+2\u001b[39m\n",
" \u001b[90m[bea87d4a] \u001b[39m\u001b[92m+ SuiteSparse_jll v7.2.1+1\u001b[39m\n",
" \u001b[90m[83775a58] \u001b[39m\u001b[92m+ Zlib_jll v1.2.13+1\u001b[39m\n",
" \u001b[90m[8e850b90] \u001b[39m\u001b[92m+ libblastrampoline_jll v5.8.0+1\u001b[39m\n",
" \u001b[90m[8e850ede] \u001b[39m\u001b[92m+ nghttp2_jll v1.52.0+1\u001b[39m\n",
" \u001b[90m[3f19e933] \u001b[39m\u001b[92m+ p7zip_jll v17.4.0+2\u001b[39m\n",
"\u001b[36m\u001b[1m Info\u001b[22m\u001b[39m Packages marked with \u001b[33m⌅\u001b[39m have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`\n",
"\u001b[32m\u001b[1mPrecompiling\u001b[22m\u001b[39m project...\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mSuppressor\u001b[39m\n",
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"\u001b[32m ✓ \u001b[39m\u001b[90mUnPack\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mCompat\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mRequires\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mCalculus\u001b[39m\n",
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"\u001b[32m ✓ \u001b[39m\u001b[90mLaTeXStrings\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mReexport\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mInflate\u001b[39m\n",
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"\u001b[32m ✓ \u001b[39m\u001b[90mCommonSolve\u001b[39m\n",
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"\u001b[32m ✓ \u001b[39mAgents\n",
" 117 dependencies successfully precompiled in 220 seconds. 8 already precompiled.\n",
"\u001b[32m\u001b[1m Resolving\u001b[22m\u001b[39m package versions...\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Libmount_jll ────────────── v2.40.1+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m x265_jll ────────────────── v3.5.0+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m libfdk_aac_jll ──────────── v2.0.2+0\n",
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"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m OffsetArrays ────────────── v1.14.0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m JpegTurbo_jll ───────────── v3.0.3+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m TiffImages ──────────────── v0.6.8\n",
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"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m FFTW ────────────────────── v1.8.0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m AxisArrays ──────────────── v0.4.7\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m RelocatableFolders ──────── v1.0.1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m PNGFiles ────────────────── v0.4.3\n",
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"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m EarCut_jll ──────────────── v2.2.4+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Grisu ───────────────────── v1.0.2\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Sixel ───────────────────── v0.1.3\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m OpenEXR ─────────────────── v0.3.2\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Contour ─────────────────── v0.6.3\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m EnumX ───────────────────── v1.0.4\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m CEnum ───────────────────── v0.5.0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m PlotUtils ───────────────── v1.4.1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Xorg_libpthread_stubs_jll ─ v0.1.1+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m IntelOpenMP_jll ─────────── v2024.1.0+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Cairo_jll ───────────────── v1.18.0+1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Fontconfig_jll ──────────── v2.13.96+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Libgpg_error_jll ────────── v1.49.0+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m SignedDistanceFields ────── v0.4.0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Netpbm ──────────────────── v1.1.1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m FilePaths ───────────────── v0.8.3\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m TriplotBase ─────────────── v0.1.0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Xorg_libXau_jll ─────────── v1.0.11+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m RoundingEmulator ────────── v0.2.1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Showoff ─────────────────── v1.0.3\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Pango_jll ───────────────── v1.52.2+0\n",
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"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m HarfBuzz_jll ────────────── v2.8.1+1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m PolygonOps ──────────────── v0.1.2\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m isoband_jll ─────────────── v0.2.3+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m QOI ─────────────────────── v1.0.0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m PkgVersion ──────────────── v0.3.3\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m LZO_jll ─────────────────── v2.10.2+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m FriBidi_jll ─────────────── v1.0.14+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m UnicodeFun ──────────────── v0.4.1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Ratios ──────────────────── v0.4.5\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m ImageMetadata ───────────── v0.9.9\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Graphics ────────────────── v1.1.2\n",
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"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m MappedArrays ────────────── v0.4.2\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m FreeType ────────────────── v4.1.1\n",
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"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Colors ──────────────────── v0.12.11\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m PaddedViews ─────────────── v0.5.12\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m GridLayoutBase ──────────── v0.10.2\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m libpng_jll ──────────────── v1.6.43+1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Xorg_libxcb_jll ─────────── v1.15.0+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m libaom_jll ──────────────── v3.4.0+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m MosaicViews ─────────────── v0.3.4\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Automa ──────────────────── v1.0.3\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m MathTeXEngine ───────────── v0.5.7\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m LazyModules ─────────────── v0.3.1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m oneTBB_jll ──────────────── v2021.12.0+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Xorg_libXext_jll ────────── v1.3.6+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Isoband ─────────────────── v0.1.1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m TensorCore ──────────────── v0.1.1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m ColorTypes ──────────────── v0.11.5\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m FreeTypeAbstraction ─────── v0.10.3\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Expat_jll ───────────────── v2.6.2+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Imath_jll ───────────────── v3.1.11+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Extents ─────────────────── v0.1.2\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m ImageCore ───────────────── v0.10.2\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m ColorSchemes ────────────── v3.25.0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m MKL_jll ─────────────────── v2024.1.0+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Format ──────────────────── v1.3.7\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Libffi_jll ──────────────── v3.2.2+1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Packing ─────────────────── v0.5.0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m ColorVectorSpace ────────── v0.10.0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m AbstractFFTs ────────────── v1.5.0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m AbstractTrees ───────────── v0.4.5\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Animations ──────────────── v0.4.1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Xorg_libXrender_jll ─────── v0.9.11+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m ExactPredicates ─────────── v2.2.8\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m ChainRulesCore ──────────── v1.23.0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Ogg_jll ─────────────────── v1.3.5+1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m XSLT_jll ────────────────── v1.1.34+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m KernelDensity ───────────── v0.6.9\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m FFTW_jll ────────────────── v3.3.10+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Libuuid_jll ─────────────── v2.40.1+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m RangeArrays ─────────────── v0.3.2\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m StackViews ──────────────── v0.1.1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m OpenEXR_jll ─────────────── v3.2.4+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m ColorBrewer ─────────────── v0.4.0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m IntervalArithmetic ──────── v0.22.11\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Interpolations ──────────── v0.15.1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Graphite2_jll ───────────── v1.3.14+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m libass_jll ──────────────── v0.15.1+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Pixman_jll ──────────────── v0.43.4+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Adapt ───────────────────── v4.0.4\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Gettext_jll ─────────────── v0.21.0+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m ImageBase ───────────────── v0.1.7\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m IntervalSets ────────────── v0.7.10\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Xorg_xtrans_jll ─────────── v1.5.0+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m IterTools ───────────────── v1.10.0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m IndirectArrays ──────────── v1.0.0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Libgcrypt_jll ───────────── v1.8.11+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m FFMPEG_jll ──────────────── v6.1.1+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m GeometryBasics ──────────── v0.4.11\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m LLVMOpenMP_jll ──────────── v15.0.7+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m MakieCore ───────────────── v0.7.3\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m ShaderAbstractions ──────── v0.4.1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m FixedPointNumbers ───────── v0.8.4\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m CairoMakie ──────────────── v0.11.11\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Cairo ───────────────────── v1.0.5\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m libvorbis_jll ───────────── v1.3.7+1\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m LAME_jll ────────────────── v3.100.2+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Glib_jll ────────────────── v2.80.2+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m StructArrays ────────────── v0.6.18\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m libsixel_jll ────────────── v1.10.3+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m AxisAlgorithms ──────────── v1.1.0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Xorg_libXdmcp_jll ───────── v1.1.4+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Xorg_libX11_jll ─────────── v1.8.6+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Observables ─────────────── v0.5.5\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m ImageAxes ───────────────── v0.6.11\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m WoodburyMatrices ────────── v1.0.0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m CRlibm_jll ──────────────── v1.0.1+0\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m GeoInterface ────────────── v1.3.4\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m Makie ───────────────────── v0.20.10\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m DelaunayTriangulation ───── v1.0.3\n",
"\u001b[32m\u001b[1m Updating\u001b[22m\u001b[39m `~/.julia/environments/v1.10/Project.toml`\n",
"\u001b[32m⌃\u001b[39m \u001b[90m[13f3f980] \u001b[39m\u001b[92m+ CairoMakie v0.11.11\u001b[39m\n",
"\u001b[32m\u001b[1m Updating\u001b[22m\u001b[39m `~/.julia/environments/v1.10/Manifest.toml`\n",
" \u001b[90m[621f4979] \u001b[39m\u001b[92m+ AbstractFFTs v1.5.0\u001b[39m\n",
" \u001b[90m[1520ce14] \u001b[39m\u001b[92m+ AbstractTrees v0.4.5\u001b[39m\n",
" \u001b[90m[79e6a3ab] \u001b[39m\u001b[92m+ Adapt v4.0.4\u001b[39m\n",
" \u001b[90m[27a7e980] \u001b[39m\u001b[92m+ Animations v0.4.1\u001b[39m\n",
" \u001b[90m[67c07d97] \u001b[39m\u001b[92m+ Automa v1.0.3\u001b[39m\n",
" \u001b[90m[13072b0f] \u001b[39m\u001b[92m+ AxisAlgorithms v1.1.0\u001b[39m\n",
" \u001b[90m[39de3d68] \u001b[39m\u001b[92m+ AxisArrays v0.4.7\u001b[39m\n",
" \u001b[90m[fa961155] \u001b[39m\u001b[92m+ CEnum v0.5.0\u001b[39m\n",
" \u001b[90m[159f3aea] \u001b[39m\u001b[92m+ Cairo v1.0.5\u001b[39m\n",
"\u001b[32m⌃\u001b[39m \u001b[90m[13f3f980] \u001b[39m\u001b[92m+ CairoMakie v0.11.11\u001b[39m\n",
" \u001b[90m[d360d2e6] \u001b[39m\u001b[92m+ ChainRulesCore v1.23.0\u001b[39m\n",
" \u001b[90m[a2cac450] \u001b[39m\u001b[92m+ ColorBrewer v0.4.0\u001b[39m\n",
" \u001b[90m[35d6a980] \u001b[39m\u001b[92m+ ColorSchemes v3.25.0\u001b[39m\n",
" \u001b[90m[3da002f7] \u001b[39m\u001b[92m+ ColorTypes v0.11.5\u001b[39m\n",
" \u001b[90m[c3611d14] \u001b[39m\u001b[92m+ ColorVectorSpace v0.10.0\u001b[39m\n",
" \u001b[90m[5ae59095] \u001b[39m\u001b[92m+ Colors v0.12.11\u001b[39m\n",
" \u001b[90m[d38c429a] \u001b[39m\u001b[92m+ Contour v0.6.3\u001b[39m\n",
" \u001b[90m[927a84f5] \u001b[39m\u001b[92m+ DelaunayTriangulation v1.0.3\u001b[39m\n",
" \u001b[90m[4e289a0a] \u001b[39m\u001b[92m+ EnumX v1.0.4\u001b[39m\n",
" \u001b[90m[429591f6] \u001b[39m\u001b[92m+ ExactPredicates v2.2.8\u001b[39m\n",
" \u001b[90m[411431e0] \u001b[39m\u001b[92m+ Extents v0.1.2\u001b[39m\n",
" \u001b[90m[7a1cc6ca] \u001b[39m\u001b[92m+ FFTW v1.8.0\u001b[39m\n",
" \u001b[90m[8fc22ac5] \u001b[39m\u001b[92m+ FilePaths v0.8.3\u001b[39m\n",
" \u001b[90m[53c48c17] \u001b[39m\u001b[92m+ FixedPointNumbers v0.8.4\u001b[39m\n",
" \u001b[90m[1fa38f19] \u001b[39m\u001b[92m+ Format v1.3.7\u001b[39m\n",
" \u001b[90m[b38be410] \u001b[39m\u001b[92m+ FreeType v4.1.1\u001b[39m\n",
" \u001b[90m[663a7486] \u001b[39m\u001b[92m+ FreeTypeAbstraction v0.10.3\u001b[39m\n",
" \u001b[90m[cf35fbd7] \u001b[39m\u001b[92m+ GeoInterface v1.3.4\u001b[39m\n",
" \u001b[90m[5c1252a2] \u001b[39m\u001b[92m+ GeometryBasics v0.4.11\u001b[39m\n",
" \u001b[90m[a2bd30eb] \u001b[39m\u001b[92m+ Graphics v1.1.2\u001b[39m\n",
"\u001b[33m⌅\u001b[39m \u001b[90m[3955a311] \u001b[39m\u001b[92m+ GridLayoutBase v0.10.2\u001b[39m\n",
" \u001b[90m[42e2da0e] \u001b[39m\u001b[92m+ Grisu v1.0.2\u001b[39m\n",
" \u001b[90m[2803e5a7] \u001b[39m\u001b[92m+ ImageAxes v0.6.11\u001b[39m\n",
" \u001b[90m[c817782e] \u001b[39m\u001b[92m+ ImageBase v0.1.7\u001b[39m\n",
" \u001b[90m[a09fc81d] \u001b[39m\u001b[92m+ ImageCore v0.10.2\u001b[39m\n",
" \u001b[90m[82e4d734] \u001b[39m\u001b[92m+ ImageIO v0.6.7\u001b[39m\n",
" \u001b[90m[bc367c6b] \u001b[39m\u001b[92m+ ImageMetadata v0.9.9\u001b[39m\n",
" \u001b[90m[9b13fd28] \u001b[39m\u001b[92m+ IndirectArrays v1.0.0\u001b[39m\n",
" \u001b[90m[a98d9a8b] \u001b[39m\u001b[92m+ Interpolations v0.15.1\u001b[39m\n",
" \u001b[90m[d1acc4aa] \u001b[39m\u001b[92m+ IntervalArithmetic v0.22.11\u001b[39m\n",
" \u001b[90m[8197267c] \u001b[39m\u001b[92m+ IntervalSets v0.7.10\u001b[39m\n",
" \u001b[90m[f1662d9f] \u001b[39m\u001b[92m+ Isoband v0.1.1\u001b[39m\n",
" \u001b[90m[c8e1da08] \u001b[39m\u001b[92m+ IterTools v1.10.0\u001b[39m\n",
" \u001b[90m[b835a17e] \u001b[39m\u001b[92m+ JpegTurbo v0.1.5\u001b[39m\n",
" \u001b[90m[5ab0869b] \u001b[39m\u001b[92m+ KernelDensity v0.6.9\u001b[39m\n",
" \u001b[90m[8cdb02fc] \u001b[39m\u001b[92m+ LazyModules v0.3.1\u001b[39m\n",
"\u001b[33m⌅\u001b[39m \u001b[90m[ee78f7c6] \u001b[39m\u001b[92m+ Makie v0.20.10\u001b[39m\n",
"\u001b[33m⌅\u001b[39m \u001b[90m[20f20a25] \u001b[39m\u001b[92m+ MakieCore v0.7.3\u001b[39m\n",
" \u001b[90m[dbb5928d] \u001b[39m\u001b[92m+ MappedArrays v0.4.2\u001b[39m\n",
"\u001b[33m⌅\u001b[39m \u001b[90m[0a4f8689] \u001b[39m\u001b[92m+ MathTeXEngine v0.5.7\u001b[39m\n",
" \u001b[90m[e94cdb99] \u001b[39m\u001b[92m+ MosaicViews v0.3.4\u001b[39m\n",
" \u001b[90m[f09324ee] \u001b[39m\u001b[92m+ Netpbm v1.1.1\u001b[39m\n",
" \u001b[90m[510215fc] \u001b[39m\u001b[92m+ Observables v0.5.5\u001b[39m\n",
" \u001b[90m[6fe1bfb0] \u001b[39m\u001b[92m+ OffsetArrays v1.14.0\u001b[39m\n",
" \u001b[90m[52e1d378] \u001b[39m\u001b[92m+ OpenEXR v0.3.2\u001b[39m\n",
" \u001b[90m[f57f5aa1] \u001b[39m\u001b[92m+ PNGFiles v0.4.3\u001b[39m\n",
" \u001b[90m[19eb6ba3] \u001b[39m\u001b[92m+ Packing v0.5.0\u001b[39m\n",
" \u001b[90m[5432bcbf] \u001b[39m\u001b[92m+ PaddedViews v0.5.12\u001b[39m\n",
" \u001b[90m[eebad327] \u001b[39m\u001b[92m+ PkgVersion v0.3.3\u001b[39m\n",
" \u001b[90m[995b91a9] \u001b[39m\u001b[92m+ PlotUtils v1.4.1\u001b[39m\n",
" \u001b[90m[647866c9] \u001b[39m\u001b[92m+ PolygonOps v0.1.2\u001b[39m\n",
" \u001b[90m[4b34888f] \u001b[39m\u001b[92m+ QOI v1.0.0\u001b[39m\n",
" \u001b[90m[b3c3ace0] \u001b[39m\u001b[92m+ RangeArrays v0.3.2\u001b[39m\n",
" \u001b[90m[c84ed2f1] \u001b[39m\u001b[92m+ Ratios v0.4.5\u001b[39m\n",
" \u001b[90m[05181044] \u001b[39m\u001b[92m+ RelocatableFolders v1.0.1\u001b[39m\n",
" \u001b[90m[5eaf0fd0] \u001b[39m\u001b[92m+ RoundingEmulator v0.2.1\u001b[39m\n",
" \u001b[90m[65257c39] \u001b[39m\u001b[92m+ ShaderAbstractions v0.4.1\u001b[39m\n",
" \u001b[90m[992d4aef] \u001b[39m\u001b[92m+ Showoff v1.0.3\u001b[39m\n",
" \u001b[90m[73760f76] \u001b[39m\u001b[92m+ SignedDistanceFields v0.4.0\u001b[39m\n",
" \u001b[90m[45858cf5] \u001b[39m\u001b[92m+ Sixel v0.1.3\u001b[39m\n",
" \u001b[90m[cae243ae] \u001b[39m\u001b[92m+ StackViews v0.1.1\u001b[39m\n",
" \u001b[90m[09ab397b] \u001b[39m\u001b[92m+ StructArrays v0.6.18\u001b[39m\n",
" \u001b[90m[62fd8b95] \u001b[39m\u001b[92m+ TensorCore v0.1.1\u001b[39m\n",
"\u001b[33m⌅\u001b[39m \u001b[90m[731e570b] \u001b[39m\u001b[92m+ TiffImages v0.6.8\u001b[39m\n",
" \u001b[90m[981d1d27] \u001b[39m\u001b[92m+ TriplotBase v0.1.0\u001b[39m\n",
" \u001b[90m[1cfade01] \u001b[39m\u001b[92m+ UnicodeFun v0.4.1\u001b[39m\n",
" \u001b[90m[efce3f68] \u001b[39m\u001b[92m+ WoodburyMatrices v1.0.0\u001b[39m\n",
" \u001b[90m[6e34b625] \u001b[39m\u001b[92m+ Bzip2_jll v1.0.8+1\u001b[39m\n",
" \u001b[90m[4e9b3aee] \u001b[39m\u001b[92m+ CRlibm_jll v1.0.1+0\u001b[39m\n",
" \u001b[90m[83423d85] \u001b[39m\u001b[92m+ Cairo_jll v1.18.0+1\u001b[39m\n",
" \u001b[90m[5ae413db] \u001b[39m\u001b[92m+ EarCut_jll v2.2.4+0\u001b[39m\n",
" \u001b[90m[2e619515] \u001b[39m\u001b[92m+ Expat_jll v2.6.2+0\u001b[39m\n",
" \u001b[90m[b22a6f82] \u001b[39m\u001b[92m+ FFMPEG_jll v6.1.1+0\u001b[39m\n",
" \u001b[90m[f5851436] \u001b[39m\u001b[92m+ FFTW_jll v3.3.10+0\u001b[39m\n",
" \u001b[90m[a3f928ae] \u001b[39m\u001b[92m+ Fontconfig_jll v2.13.96+0\u001b[39m\n",
" \u001b[90m[d7e528f0] \u001b[39m\u001b[92m+ FreeType2_jll v2.13.1+0\u001b[39m\n",
" \u001b[90m[559328eb] \u001b[39m\u001b[92m+ FriBidi_jll v1.0.14+0\u001b[39m\n",
" \u001b[90m[78b55507] \u001b[39m\u001b[92m+ Gettext_jll v0.21.0+0\u001b[39m\n",
" \u001b[90m[7746bdde] \u001b[39m\u001b[92m+ Glib_jll v2.80.2+0\u001b[39m\n",
" \u001b[90m[3b182d85] \u001b[39m\u001b[92m+ Graphite2_jll v1.3.14+0\u001b[39m\n",
" \u001b[90m[2e76f6c2] \u001b[39m\u001b[92m+ HarfBuzz_jll v2.8.1+1\u001b[39m\n",
" \u001b[90m[905a6f67] \u001b[39m\u001b[92m+ Imath_jll v3.1.11+0\u001b[39m\n",
" \u001b[90m[1d5cc7b8] \u001b[39m\u001b[92m+ IntelOpenMP_jll v2024.1.0+0\u001b[39m\n",
" \u001b[90m[aacddb02] \u001b[39m\u001b[92m+ JpegTurbo_jll v3.0.3+0\u001b[39m\n",
" \u001b[90m[c1c5ebd0] \u001b[39m\u001b[92m+ LAME_jll v3.100.2+0\u001b[39m\n",
" \u001b[90m[1d63c593] \u001b[39m\u001b[92m+ LLVMOpenMP_jll v15.0.7+0\u001b[39m\n",
" \u001b[90m[dd4b983a] \u001b[39m\u001b[92m+ LZO_jll v2.10.2+0\u001b[39m\n",
"\u001b[33m⌅\u001b[39m \u001b[90m[e9f186c6] \u001b[39m\u001b[92m+ Libffi_jll v3.2.2+1\u001b[39m\n",
" \u001b[90m[d4300ac3] \u001b[39m\u001b[92m+ Libgcrypt_jll v1.8.11+0\u001b[39m\n",
" \u001b[90m[7add5ba3] \u001b[39m\u001b[92m+ Libgpg_error_jll v1.49.0+0\u001b[39m\n",
" \u001b[90m[4b2f31a3] \u001b[39m\u001b[92m+ Libmount_jll v2.40.1+0\u001b[39m\n",
" \u001b[90m[38a345b3] \u001b[39m\u001b[92m+ Libuuid_jll v2.40.1+0\u001b[39m\n",
" \u001b[90m[856f044c] \u001b[39m\u001b[92m+ MKL_jll v2024.1.0+0\u001b[39m\n",
" \u001b[90m[e7412a2a] \u001b[39m\u001b[92m+ Ogg_jll v1.3.5+1\u001b[39m\n",
" \u001b[90m[18a262bb] \u001b[39m\u001b[92m+ OpenEXR_jll v3.2.4+0\u001b[39m\n",
" \u001b[90m[91d4177d] \u001b[39m\u001b[92m+ Opus_jll v1.3.2+0\u001b[39m\n",
" \u001b[90m[36c8627f] \u001b[39m\u001b[92m+ Pango_jll v1.52.2+0\u001b[39m\n",
" \u001b[90m[30392449] \u001b[39m\u001b[92m+ Pixman_jll v0.43.4+0\u001b[39m\n",
" \u001b[90m[aed1982a] \u001b[39m\u001b[92m+ XSLT_jll v1.1.34+0\u001b[39m\n",
" \u001b[90m[4f6342f7] \u001b[39m\u001b[92m+ Xorg_libX11_jll v1.8.6+0\u001b[39m\n",
" \u001b[90m[0c0b7dd1] \u001b[39m\u001b[92m+ Xorg_libXau_jll v1.0.11+0\u001b[39m\n",
" \u001b[90m[a3789734] \u001b[39m\u001b[92m+ Xorg_libXdmcp_jll v1.1.4+0\u001b[39m\n",
" \u001b[90m[1082639a] \u001b[39m\u001b[92m+ Xorg_libXext_jll v1.3.6+0\u001b[39m\n",
" \u001b[90m[ea2f1a96] \u001b[39m\u001b[92m+ Xorg_libXrender_jll v0.9.11+0\u001b[39m\n",
" \u001b[90m[14d82f49] \u001b[39m\u001b[92m+ Xorg_libpthread_stubs_jll v0.1.1+0\u001b[39m\n",
" \u001b[90m[c7cfdc94] \u001b[39m\u001b[92m+ Xorg_libxcb_jll v1.15.0+0\u001b[39m\n",
" \u001b[90m[c5fb5394] \u001b[39m\u001b[92m+ Xorg_xtrans_jll v1.5.0+0\u001b[39m\n",
" \u001b[90m[9a68df92] \u001b[39m\u001b[92m+ isoband_jll v0.2.3+0\u001b[39m\n",
" \u001b[90m[a4ae2306] \u001b[39m\u001b[92m+ libaom_jll v3.4.0+0\u001b[39m\n",
" \u001b[90m[0ac62f75] \u001b[39m\u001b[92m+ libass_jll v0.15.1+0\u001b[39m\n",
" \u001b[90m[f638f0a6] \u001b[39m\u001b[92m+ libfdk_aac_jll v2.0.2+0\u001b[39m\n",
" \u001b[90m[b53b4c65] \u001b[39m\u001b[92m+ libpng_jll v1.6.43+1\u001b[39m\n",
" \u001b[90m[075b6546] \u001b[39m\u001b[92m+ libsixel_jll v1.10.3+0\u001b[39m\n",
" \u001b[90m[f27f6e37] \u001b[39m\u001b[92m+ libvorbis_jll v1.3.7+1\u001b[39m\n",
" \u001b[90m[1317d2d5] \u001b[39m\u001b[92m+ oneTBB_jll v2021.12.0+0\u001b[39m\n",
" \u001b[90m[1270edf5] \u001b[39m\u001b[92m+ x264_jll v2021.5.5+0\u001b[39m\n",
" \u001b[90m[dfaa095f] \u001b[39m\u001b[92m+ x265_jll v3.5.0+0\u001b[39m\n",
" \u001b[90m[8bf52ea8] \u001b[39m\u001b[92m+ CRC32c\u001b[39m\n",
" \u001b[90m[efcefdf7] \u001b[39m\u001b[92m+ PCRE2_jll v10.42.0+1\u001b[39m\n",
"\u001b[36m\u001b[1m Info\u001b[22m\u001b[39m Packages marked with \u001b[32m⌃\u001b[39m and \u001b[33m⌅\u001b[39m have new versions available. Those with \u001b[32m⌃\u001b[39m may be upgradable, but those with \u001b[33m⌅\u001b[39m are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`\n",
"\u001b[32m\u001b[1mPrecompiling\u001b[22m\u001b[39m project...\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mPolygonOps\u001b[39m\n",
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"\u001b[32m ✓ \u001b[39m\u001b[90mIndirectArrays\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mRangeArrays\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mTensorCore\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mCEnum\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mTriplotBase\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mAbstractFFTs\u001b[39m\n",
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"\u001b[32m ✓ \u001b[39m\u001b[90mObservables\u001b[39m\n",
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"\u001b[32m ✓ \u001b[39m\u001b[90mIterTools\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mOffsetArrays\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mAbstractTrees\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mIntervalSets\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mGrisu\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mExtents\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mRoundingEmulator\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mLazyModules\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mFormat\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mRatios\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mAdapt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mMappedArrays\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mRelocatableFolders\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mLibmount_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mGraphite2_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mWoodburyMatrices\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mBzip2_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mLLVMOpenMP_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mXorg_libXau_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mChainRulesCore\u001b[39m\n",
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"\u001b[32m ✓ \u001b[39m\u001b[90mIntelOpenMP_jll\u001b[39m\n",
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"\u001b[32m ✓ \u001b[39m\u001b[90mOgg_jll\u001b[39m\n",
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"\u001b[32m ✓ \u001b[39m\u001b[90mFFTW_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mFriBidi_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mLibuuid_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mSignedDistanceFields\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mGettext_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mIntervalSets → IntervalSetsRandomExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mFilePaths\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mConstructionBase → ConstructionBaseIntervalSetsExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mShowoff\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mMakieCore\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mOffsetArrays → OffsetArraysAdaptExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mAdapt → AdaptStaticArraysExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mAxisAlgorithms\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mPixman_jll\u001b[39m\n",
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"\u001b[32m ✓ \u001b[39m\u001b[90mChainRulesCore → ChainRulesCoreSparseArraysExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mGeoInterface\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mAbstractFFTs → AbstractFFTsChainRulesCoreExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mStaticArrays → StaticArraysChainRulesCoreExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mDistances → DistancesChainRulesCoreExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mOpenEXR_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mlibsixel_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mLogExpFunctions → LogExpFunctionsChainRulesCoreExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mIsoband\u001b[39m\n",
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"\u001b[32m ✓ \u001b[39m\u001b[90mFixedPointNumbers\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mGlib_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mAccessors → AccessorsIntervalSetsExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mStackViews\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mPaddedViews\u001b[39m\n",
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"\u001b[32m ✓ \u001b[39m\u001b[90mAbstractFFTs → AbstractFFTsTestExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mMosaicViews\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mStructArrays → StructArraysStaticArraysExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mAccessors → AccessorsStructArraysExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mSpecialFunctions → SpecialFunctionsChainRulesCoreExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mStructArrays → StructArraysSparseArraysExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mXorg_libxcb_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mStructArrays → StructArraysAdaptExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mXorg_libX11_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mStatsFuns → StatsFunsChainRulesCoreExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mColorTypes\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mInterpolations\u001b[39m\n",
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"\u001b[32m ✓ \u001b[39m\u001b[90mXorg_libXrender_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mQOI\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mDistributions → DistributionsChainRulesCoreExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mExactPredicates\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mCairo_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mHarfBuzz_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mAutoma\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mlibass_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mPango_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mColorVectorSpace\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mFFMPEG_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mColorVectorSpace → SpecialFunctionsExt\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mColors\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mAnimations\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mColorBrewer\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mGeometryBasics\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mGraphics\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mDelaunayTriangulation\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mOpenEXR\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mPacking\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mCairo\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mShaderAbstractions\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mFreeTypeAbstraction\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mColorSchemes\u001b[39m\n",
"MKL_jll\u001b[33m Waiting for background task / IO / timer.\u001b[39m\n",
"[pid 35608] waiting for IO to finish:\n",
" Handle type uv_handle_t->data\n",
" timer 0x2908a90->0x7d4b9bcc40d0\n",
"This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mGridLayoutBase\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mMKL_jll\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mMathTeXEngine\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mPlotUtils\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mFFTW\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mKernelDensity\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mImageCore\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mJpegTurbo\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mSixel\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mImageBase\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mPNGFiles\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mImageAxes\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mImageMetadata\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mNetpbm\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mTiffImages\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mImageIO\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mMakie\u001b[39m\n",
"\u001b[32m ✓ \u001b[39m\u001b[90mAgents → AgentsVisualizations\u001b[39m\n",
"\u001b[32m ✓ \u001b[39mCairoMakie\n",
" 149 dependencies successfully precompiled in 344 seconds. 126 already precompiled.\n",
" \u001b[33m2\u001b[39m dependencies had output during precompilation:\u001b[33m\n",
"┌ \u001b[39mMKL_jll\u001b[33m\n",
"│ \u001b[39m\u001b[32m\u001b[1m Downloading\u001b[22m\u001b[39m artifact: MKL\u001b[33m\n",
"│ \u001b[39m\u001b[33m\n",
"│ \u001b[39m[pid 35608] waiting for IO to finish:\u001b[33m\n",
"│ \u001b[39m Handle type uv_handle_t->data\u001b[33m\n",
"│ \u001b[39m timer 0x2908a90->0x7d4b9bcc40d0\u001b[33m\n",
"│ \u001b[39mThis means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.\u001b[33m\n",
"└ \u001b[39m\u001b[33m\n",
"┌ \u001b[39mAgents → AgentsVisualizations\u001b[33m\n",
"│ \u001b[39m\u001b[95mUpdate message: Agents v6\u001b[39m\u001b[33m\n",
"│ \u001b[39m\u001b[33m\n",
"│ \u001b[39m\u001b[95mThis is a new major version of Agents.jl with lots of cool stuff!\u001b[39m\u001b[33m\n",
"│ \u001b[39m\u001b[95mHowever, from this version onwards, we will stop posting update messages\u001b[39m\u001b[33m\n",
"│ \u001b[39m\u001b[95mto the REPL console!\u001b[39m\u001b[33m\n",
"│ \u001b[39m\u001b[33m\n",
"│ \u001b[39m\u001b[95mIf you want to be updated, follow this discourse post:\u001b[39m\u001b[33m\n",
"│ \u001b[39m\u001b[33m\n",
"│ \u001b[39m\u001b[95mhttps://discourse.julialang.org/t/agents-jl-v6-releases-announcement-post/111678\u001b[39m\u001b[33m\n",
"│ \u001b[39m\u001b[33m\n",
"│ \u001b[39m\u001b[95m(and see the CHANGELOG.md file online for a list of changes!)\u001b[39m\u001b[33m\n",
"└ \u001b[39m\n"
"\u001b[32m\u001b[1m Activating\u001b[22m\u001b[39m project at `~/Studium/SCJ-PredatorPrey/env`\n"
]
}
],
"source": [
"import Pkg\n",
"Pkg.add(\"Agents\")\n",
"Pkg.add(\"CairoMakie\")"
"Pkg.activate(\"./env\")"
]
},
{
"cell_type": "code",
"execution_count": 1,
"execution_count": 4,
"metadata": {},
"outputs": [],
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"\u001b[32m\u001b[1m Resolving\u001b[22m\u001b[39m package versions...\n",
"\u001b[32m\u001b[1m No Changes\u001b[22m\u001b[39m to `~/Studium/SCJ-PredatorPrey/env/Project.toml`\n",
"\u001b[32m\u001b[1m No Changes\u001b[22m\u001b[39m to `~/Studium/SCJ-PredatorPrey/env/Manifest.toml`\n",
"\u001b[32m\u001b[1m Resolving\u001b[22m\u001b[39m package versions...\n",
"\u001b[32m\u001b[1m Installed\u001b[22m\u001b[39m AgentsExampleZoo ─ v0.1.2\n",
"\u001b[32m\u001b[1m Updating\u001b[22m\u001b[39m `~/Studium/SCJ-PredatorPrey/env/Project.toml`\n",
" \u001b[90m[88acaeb2] \u001b[39m\u001b[92m+ AgentsExampleZoo v0.1.2\u001b[39m\n",
"\u001b[32m\u001b[1m Updating\u001b[22m\u001b[39m `~/Studium/SCJ-PredatorPrey/env/Manifest.toml`\n",
" \u001b[90m[88acaeb2] \u001b[39m\u001b[92m+ AgentsExampleZoo v0.1.2\u001b[39m\n",
"\u001b[32m\u001b[1mPrecompiling\u001b[22m\u001b[39m project...\n",
"\u001b[32m ✓ \u001b[39mAgentsExampleZoo\n",
" 1 dependency successfully precompiled in 4 seconds. 288 already precompiled.\n",
"\u001b[32m\u001b[1m Resolving\u001b[22m\u001b[39m package versions...\n",
"\u001b[32m\u001b[1m No Changes\u001b[22m\u001b[39m to `~/Studium/SCJ-PredatorPrey/env/Project.toml`\n",
"\u001b[32m\u001b[1m No Changes\u001b[22m\u001b[39m to `~/Studium/SCJ-PredatorPrey/env/Manifest.toml`\n",
"\u001b[32m\u001b[1m Resolving\u001b[22m\u001b[39m package versions...\n",
"\u001b[32m\u001b[1m No Changes\u001b[22m\u001b[39m to `~/Studium/SCJ-PredatorPrey/env/Project.toml`\n",
"\u001b[32m\u001b[1m No Changes\u001b[22m\u001b[39m to `~/Studium/SCJ-PredatorPrey/env/Manifest.toml`\n"
]
}
],
"source": [
"Pkg.add(\"Agents\")\n",
"Pkg.add(\"AgentsExampleZoo\")\n",
"Pkg.add(\"CairoMakie\")\n",
"Pkg.add(\"GLMakie\")"
]
},
{
"cell_type": "code",
"execution_count": 13,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"(agent_color = acolor, agent_size = 25, agent_marker = ashape, offset = offset, agentsplotkwargs = (strokewidth = 1.0, strokecolor = :black), heatarray = grasscolor, heatkwargs = (colormap = [:brown, :green], colorrange = (0, 1)))"
]
},
"metadata": {},
"output_type": "display_data"
}
],
"source": [
"include(\"./predator_prey.jl\")\n",
"CairoMakie.activate!() # hide\n",
"\n",
"# To view our starting population, we can build an overview plot using [`abmplot`](@ref).\n",
"# We define the plotting details for the wolves and sheep:\n",
"offset(a) = a isa Sheep ? (-0.1, -0.1*rand()) : (+0.1, +0.1*rand())\n",
@ -859,18 +91,59 @@
" agentsplotkwargs = (strokewidth = 1.0, strokecolor = :black),\n",
" heatarray = grasscolor,\n",
" heatkwargs = heatkwargs,\n",
")\n",
"\n",
")"
]
},
{
"cell_type": "code",
"execution_count": 28,
"metadata": {},
"outputs": [],
"source": [
"include(\"./predator_prey.jl\")\n",
"Pkg.status([\"Agents\",\"GLMakie\"]; mode = Pkg.Types.PKGMODE_MANIFEST, io=stdout)\n",
"using GLMakie\n",
"GLMakie.activate!()\n",
"stable_params = (;\n",
"n_sheep = 140,\n",
"n_wolves = 3,\n",
"dims = (30, 30),\n",
"Δenergy_sheep = 5,\n",
"sheep_reproduce = 0.31,\n",
"wolf_reproduce = 0.06,\n",
"Δenergy_wolf = 30,\n",
"seed = 71758,\n",
" n_sheep = 140,\n",
" n_wolves = 3,\n",
" dims = (30, 30),\n",
" Δenergy_sheep = 5,\n",
" sheep_reproduce = 0.31,\n",
" sheep_perception = 0,\n",
" wolf_reproduce = 0.06,\n",
" Δenergy_wolf = 30,\n",
" wolf_perception = 0,\n",
" seed = 71758,\n",
")\n",
"params = Dict(\n",
" :regrowth_time => 0:1:100,\n",
" :Δenergy_sheep => 0:1:50,\n",
" :sheep_reproduce => 0:0.01:1,\n",
" :sheep_perception => 0:1:8,\n",
" :Δenergy_wolf => 0:1:50,\n",
" :wolf_reproduce => 0:0.01:1,\n",
" :wolf_perception => 0:1:8,\n",
")\n",
"sheep(a) = a isa Sheep\n",
"wolf(a) = a isa Wolf\n",
"count_grass(model) = count(model.fully_grown)\n",
"adata = [(sheep, count), (wolf, count)]\n",
"mdata = [count_grass]\n",
"model = initialize_model(;stable_params...)\n",
"fig, abmobs = abmexploration(model;params, plotkwargs..., adata, alabels = [\"Sheep\", \"Wolf\"], mdata, mlabels = [\"Grass\"])\n",
"#fig, ax, abmobs = abmplot(model; add_controls=true, plotkwargs...)\n",
"fig"
]
},
{
"cell_type": "code",
"execution_count": 1,
"metadata": {},
"outputs": [],
"source": [
"include(\"./predator_prey.jl\")\n",
"CairoMakie.activate!() # hide\n",
"sheepwolfgrass = initialize_model(;stable_params...)\n",
"\n",
"abmvideo(\n",