741 lines
1.1 MiB
Plaintext
741 lines
1.1 MiB
Plaintext
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{
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"cells": [
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{
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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"# Feature Detection\n",
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"\n",
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"This Notebook is used to test the detection ability of the NeuroKit2 library to detect features in the ECG dataset. Those features than are important to train the model to detect the different diagnostic groups. The features are generated using the NeuroKit2 library."
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]
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},
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{
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"cell_type": "code",
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"execution_count": 2,
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"metadata": {},
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"outputs": [],
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"source": [
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"from matplotlib import pyplot as plt\n",
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"import wfdb.processing\n",
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"import sys\n",
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"import json\n",
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"import scipy\n",
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"import numpy as np\n",
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"import neurokit2 as nk\n",
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"import math\n",
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"\n",
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"sys.path.append('../scripts')\n",
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"import data_helper\n",
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"\n",
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"# possible liberays to use:\n",
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"# https://neuropsychology.github.io/NeuroKit/examples/ecg_delineate/ecg_delineate.html\n",
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"# https://biosppy.readthedocs.io/en/stable/\n",
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"# https://python-heart-rate-analysis-toolkit.readthedocs.io/en/latest/\n",
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"# https://pywavelets.readthedocs.io/en/latest/"
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]
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},
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{
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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"## Load Data"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 3,
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"metadata": {},
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"outputs": [
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"Reading GSVT\n",
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"Reading AFIB\n",
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"Reading SR\n",
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"Reading SB\n",
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"Number of patients per category:\n",
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"GSVT: 1027\n",
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"AFIB: 9787\n",
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"SR: 10426\n",
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"SB: 15826\n"
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]
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}
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],
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"source": [
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"data_org = data_helper.load_data(only_demographic=False)\n",
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"\n",
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"print(\"Number of patients per category:\")\n",
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"for cat_name in data_org.keys():\n",
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" print(f\"{cat_name}: {len(data_org[cat_name])}\")"
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]
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},
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{
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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"# Noise Reduction\n",
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"Load the parameters needed to filter the data"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 4,
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"metadata": {},
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"outputs": [],
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"source": [
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"with open('../filter_params.json', 'r') as f:\n",
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" filter_params = json.load(f)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 5,
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"metadata": {},
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"outputs": [],
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"source": [
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"example_data = data_org['SB'][0]\n",
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"sig_channel= 0"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 6,
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"metadata": {},
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"outputs": [],
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"source": [
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"filtered_data = data_helper.filter_data(example_data, filter_params)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 7,
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"metadata": {},
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"outputs": [
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{
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"data": {
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"image/png": "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"text/plain": [
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"<Figure size 1000x500 with 1 Axes>"
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]
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},
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"metadata": {},
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"output_type": "display_data"
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}
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],
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"source": [
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"#data = filtered_data.p_signal[:,sig_channel]\n",
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"ecg_signal = data_org['SB'][0].p_signal[:,sig_channel]\n",
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"ecg_signal = filtered_data.p_signal[:,sig_channel]\n",
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"\n",
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"sampling_rate = 500 # Sampling rate of your ECG data\n",
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"\n",
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"\n",
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"ecg_cleaned = nk.ecg_clean(ecg_signal, sampling_rate=sampling_rate)\n",
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"\n",
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"# Plot the original and denoised signal\n",
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"plt.figure(figsize=(10, 5))\n",
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"plt.plot(example_data.p_signal[:,0], label='Original signal')\n",
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"plt.plot(ecg_cleaned, label='bib filtered signal')\n",
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"#plt.plot(filtered_data.p_signal[:,0], label='self filtered signal')\n",
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"plt.xlabel('Time')\n",
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"plt.ylabel('Amplitude')\n",
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"plt.title('Signal with and without All Denoising')\n",
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"plt.legend()\n",
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"plt.grid(True)\n",
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"plt.show()\n"
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]
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},
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{
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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"# Detect Peaks"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 8,
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"metadata": {},
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"outputs": [
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"[477, 1050, 1617, 2216, 2750, 3386, 3890, 4482]\n",
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"[439, 1019, 1590, 2186, 2727, 3356, 3876, 4458]\n",
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"[512, 1075, 1647, 2248, 2757, 3421, 3915, 4496]\n"
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]
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}
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],
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"source": [
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"# Extract R-peaks\n",
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"_, rpeaks = nk.ecg_peaks(ecg_cleaned, sampling_rate=sampling_rate)\n",
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"\n",
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"# Extract all ECG features\n",
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"ecg_signals, info = nk.ecg_delineate(ecg_cleaned, rpeaks, sampling_rate=sampling_rate, method=\"dwt\")\n",
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"\n",
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"# Normalize data by setting qrs peaks to index position 0 (“X-axis normalization”)\n",
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"p_peaks = info['ECG_P_Peaks']\n",
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"p_onsets = info['ECG_P_Onsets']\n",
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"p_offsets = info['ECG_P_Offsets']\n",
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"print(p_peaks)\n",
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"print(p_onsets)\n",
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"print(p_offsets)\n",
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"\n",
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"p_peaks_y = [ecg_cleaned[i] for i in p_peaks] \n",
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"p_onsets_y = [ecg_cleaned[i] for i in p_onsets]\n",
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"p_offsets_y = [ecg_cleaned[i] for i in p_offsets]"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 9,
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"metadata": {},
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"outputs": [
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{
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"data": {
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|
|
"image/png": "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
|
||
|
|
"text/plain": [
|
||
|
|
"<Figure size 640x480 with 3 Axes>"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
"metadata": {},
|
||
|
|
"output_type": "display_data"
|
||
|
|
}
|
||
|
|
],
|
||
|
|
"source": [
|
||
|
|
"# Process it\n",
|
||
|
|
"signals, info = nk.ecg_process(ecg_cleaned, sampling_rate=500)\n",
|
||
|
|
"\n",
|
||
|
|
"# Visualise the processing\n",
|
||
|
|
"nk.ecg_plot(signals, info)"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"cell_type": "code",
|
||
|
|
"execution_count": 10,
|
||
|
|
"metadata": {},
|
||
|
|
"outputs": [
|
||
|
|
{
|
||
|
|
"name": "stdout",
|
||
|
|
"output_type": "stream",
|
||
|
|
"text": [
|
||
|
|
"[693, 1262, 1835, 2435, 3005, 3603, 4165, 4758]\n",
|
||
|
|
"[636, 1234, 1786, 2388, 2947, 3546, 4122, 4698]\n",
|
||
|
|
"[737, 1307, 1881, 2476, 3049, 3651, 4214, 4799]\n"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"data": {
|
||
|
|
"image/png": "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
|
||
|
|
"text/plain": [
|
||
|
|
"<Figure size 1000x500 with 1 Axes>"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
"metadata": {},
|
||
|
|
"output_type": "display_data"
|
||
|
|
}
|
||
|
|
],
|
||
|
|
"source": [
|
||
|
|
"t_peaks = info['ECG_T_Peaks']\n",
|
||
|
|
"t_onsets = info['ECG_T_Onsets']\n",
|
||
|
|
"t_offsets = info['ECG_T_Offsets']\n",
|
||
|
|
"\n",
|
||
|
|
"print(t_peaks)\n",
|
||
|
|
"print(t_onsets)\n",
|
||
|
|
"print(t_offsets)\n",
|
||
|
|
"\n",
|
||
|
|
"t_peaks_y = [ecg_cleaned[i] for i in t_peaks] \n",
|
||
|
|
"t_onsets_y = [ecg_cleaned[i] for i in t_onsets]\n",
|
||
|
|
"t_offsets_y = [ecg_cleaned[i] for i in t_offsets]\n",
|
||
|
|
"\n",
|
||
|
|
"plt.figure(figsize=(10, 5))\n",
|
||
|
|
"plt.plot(ecg_cleaned)\n",
|
||
|
|
"plt.scatter(t_peaks, t_peaks_y, color='red', label='t_peaks')\n",
|
||
|
|
"plt.scatter(t_onsets, t_onsets_y, color='green', label='t_onsets')\n",
|
||
|
|
"plt.scatter(t_offsets, t_offsets_y, color='blue', label='t_offsets')\n",
|
||
|
|
"plt.xlabel('Time')\n",
|
||
|
|
"plt.ylabel('Amplitude')\n",
|
||
|
|
"plt.title('Filtered XQRS Signal with Peaks')\n",
|
||
|
|
"plt.legend()\n",
|
||
|
|
"plt.grid(True)\n",
|
||
|
|
"plt.show()"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"cell_type": "code",
|
||
|
|
"execution_count": 11,
|
||
|
|
"metadata": {},
|
||
|
|
"outputs": [
|
||
|
|
{
|
||
|
|
"name": "stdout",
|
||
|
|
"output_type": "stream",
|
||
|
|
"text": [
|
||
|
|
"[477, 1050, 1617, 2217, 2788, 3386, 3890, 4543]\n",
|
||
|
|
"[438, 1018, 1589, 2184, 2763, 3355, 3876, 4511]\n",
|
||
|
|
"[514, 1076, 1648, 2248, 2820, 3421, 3914, 4574]\n"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"data": {
|
||
|
|
"image/png": "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
|
||
|
|
"text/plain": [
|
||
|
|
"<Figure size 1000x500 with 1 Axes>"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
"metadata": {},
|
||
|
|
"output_type": "display_data"
|
||
|
|
}
|
||
|
|
],
|
||
|
|
"source": [
|
||
|
|
"p_peaks = info['ECG_P_Peaks']\n",
|
||
|
|
"p_onsets = info['ECG_P_Onsets']\n",
|
||
|
|
"p_offsets = info['ECG_P_Offsets']\n",
|
||
|
|
"print(p_peaks)\n",
|
||
|
|
"print(p_onsets)\n",
|
||
|
|
"print(p_offsets)\n",
|
||
|
|
"\n",
|
||
|
|
"p_peaks_y = [ecg_cleaned[i] for i in p_peaks] \n",
|
||
|
|
"p_onsets_y = [ecg_cleaned[i] for i in p_onsets]\n",
|
||
|
|
"p_offsets_y = [ecg_cleaned[i] for i in p_offsets]\n",
|
||
|
|
"\n",
|
||
|
|
"plt.figure(figsize=(10, 5))\n",
|
||
|
|
"plt.plot(ecg_cleaned)\n",
|
||
|
|
"plt.scatter(p_peaks, p_peaks_y, color='red', label='p_peaks')\n",
|
||
|
|
"plt.scatter(p_onsets, p_onsets_y, color='green', label='p_onsets')\n",
|
||
|
|
"plt.scatter(p_offsets, p_offsets_y, color='blue', label='p_offsets')\n",
|
||
|
|
"plt.xlabel('Time')\n",
|
||
|
|
"plt.ylabel('Amplitude')\n",
|
||
|
|
"plt.title('Filtered XQRS Signal with Peaks')\n",
|
||
|
|
"plt.legend()\n",
|
||
|
|
"plt.grid(True)\n",
|
||
|
|
"plt.show()\n"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"cell_type": "code",
|
||
|
|
"execution_count": 12,
|
||
|
|
"metadata": {},
|
||
|
|
"outputs": [
|
||
|
|
{
|
||
|
|
"name": "stdout",
|
||
|
|
"output_type": "stream",
|
||
|
|
"text": [
|
||
|
|
"[523, 1086, 1658, 2256, 2830, 3430, 3990]\n",
|
||
|
|
"[563, 1132, 1701, 2300, 2873, 3471, 4034]\n",
|
||
|
|
"[482, 1055, 1622, 2221, 2794, 3391, 3957]\n",
|
||
|
|
"[580, 1151, 1720, 2317, 2893, 3491, 4055]\n"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"data": {
|
||
|
|
"image/png": "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
|
||
|
|
"text/plain": [
|
||
|
|
"<Figure size 1000x500 with 1 Axes>"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
"metadata": {},
|
||
|
|
"output_type": "display_data"
|
||
|
|
}
|
||
|
|
],
|
||
|
|
"source": [
|
||
|
|
"# 'ECG_Q_Peaks', 'ECG_R_Onsets', 'ECG_R_Offsets', 'ECG_S_Peaks'\n",
|
||
|
|
"\n",
|
||
|
|
"\n",
|
||
|
|
"q_peaks = info['ECG_Q_Peaks'][:-1]\n",
|
||
|
|
"s_peaks = info['ECG_S_Peaks'][:-1]\n",
|
||
|
|
"r_onsets = info['ECG_R_Onsets'][:-1]\n",
|
||
|
|
"r_offsets = info['ECG_R_Offsets'][:-1]\n",
|
||
|
|
"\n",
|
||
|
|
"print(q_peaks)\n",
|
||
|
|
"print(s_peaks)\n",
|
||
|
|
"print(r_onsets)\n",
|
||
|
|
"print(r_offsets)\n",
|
||
|
|
"\n",
|
||
|
|
"q_peaks_y = [ecg_cleaned[i] for i in q_peaks] \n",
|
||
|
|
"s_peaks_y = [ecg_cleaned[i] for i in s_peaks]\n",
|
||
|
|
"r_onsets_y = [ecg_cleaned[i] for i in r_onsets]\n",
|
||
|
|
"r_offsets_y = [ecg_cleaned[i] for i in r_offsets]\n",
|
||
|
|
"\n",
|
||
|
|
"plt.figure(figsize=(10, 5))\n",
|
||
|
|
"plt.plot(ecg_cleaned)\n",
|
||
|
|
"plt.scatter(q_peaks, q_peaks_y, color='red', label='q_peaks')\n",
|
||
|
|
"plt.scatter(s_peaks, s_peaks_y, color='green', label='s_peaks')\n",
|
||
|
|
"plt.scatter(r_onsets, r_onsets_y, color='blue', label='r_onsets')\n",
|
||
|
|
"plt.scatter(r_offsets, r_offsets_y, color='purple', label='r_offsets')\n",
|
||
|
|
"plt.xlabel('Time')\n",
|
||
|
|
"plt.ylabel('Amplitude')\n",
|
||
|
|
"plt.title('Filtered XQRS Signal with Peaks')\n",
|
||
|
|
"plt.legend()\n",
|
||
|
|
"plt.grid(True)\n",
|
||
|
|
"plt.show()"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"cell_type": "code",
|
||
|
|
"execution_count": 13,
|
||
|
|
"metadata": {},
|
||
|
|
"outputs": [
|
||
|
|
{
|
||
|
|
"data": {
|
||
|
|
"image/png": "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
|
||
|
|
"text/plain": [
|
||
|
|
"<Figure size 640x480 with 1 Axes>"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
"metadata": {},
|
||
|
|
"output_type": "display_data"
|
||
|
|
}
|
||
|
|
],
|
||
|
|
"source": [
|
||
|
|
"# Delineate the ECG signal and visualizing all peaks of ECG complexes\n",
|
||
|
|
"_, waves_peak = nk.ecg_delineate(ecg_signal, \n",
|
||
|
|
" rpeaks, \n",
|
||
|
|
" sampling_rate=500, \n",
|
||
|
|
" method=\"peak\", \n",
|
||
|
|
" show=True, \n",
|
||
|
|
" show_type='peaks')"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"cell_type": "code",
|
||
|
|
"execution_count": 14,
|
||
|
|
"metadata": {},
|
||
|
|
"outputs": [
|
||
|
|
{
|
||
|
|
"data": {
|
||
|
|
"image/png": "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
|
||
|
|
"text/plain": [
|
||
|
|
"<Figure size 640x480 with 1 Axes>"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
"metadata": {},
|
||
|
|
"output_type": "display_data"
|
||
|
|
}
|
||
|
|
],
|
||
|
|
"source": [
|
||
|
|
"# Delineate the ECG signal and visualizing all P-peaks boundaries\n",
|
||
|
|
"signal_peak, waves_peak = nk.ecg_delineate(ecg_signal, \n",
|
||
|
|
" rpeaks, \n",
|
||
|
|
" sampling_rate=500,\n",
|
||
|
|
" method=\"peak\", \n",
|
||
|
|
" show=True, \n",
|
||
|
|
" show_type='bounds_P')"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"cell_type": "code",
|
||
|
|
"execution_count": 15,
|
||
|
|
"metadata": {},
|
||
|
|
"outputs": [
|
||
|
|
{
|
||
|
|
"data": {
|
||
|
|
"image/png": "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
|
||
|
|
"text/plain": [
|
||
|
|
"<Figure size 640x480 with 1 Axes>"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
"metadata": {},
|
||
|
|
"output_type": "display_data"
|
||
|
|
}
|
||
|
|
],
|
||
|
|
"source": [
|
||
|
|
"# Delineate the ECG signal and visualizing all T-peaks boundaries\n",
|
||
|
|
"signal_peaj, waves_peak = nk.ecg_delineate(ecg_signal, \n",
|
||
|
|
" rpeaks, \n",
|
||
|
|
" sampling_rate=500, \n",
|
||
|
|
" method=\"peak\", \n",
|
||
|
|
" show=True, \n",
|
||
|
|
" show_type='bounds_T')"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"cell_type": "code",
|
||
|
|
"execution_count": 16,
|
||
|
|
"metadata": {},
|
||
|
|
"outputs": [
|
||
|
|
{
|
||
|
|
"data": {
|
||
|
|
"image/png": "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
|
||
|
|
"text/plain": [
|
||
|
|
"<Figure size 640x480 with 1 Axes>"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
"metadata": {},
|
||
|
|
"output_type": "display_data"
|
||
|
|
}
|
||
|
|
],
|
||
|
|
"source": [
|
||
|
|
"# Delineate the ECG signal\n",
|
||
|
|
"signal_cwt, waves_cwt = nk.ecg_delineate(ecg_signal, \n",
|
||
|
|
" rpeaks, \n",
|
||
|
|
" sampling_rate=500, \n",
|
||
|
|
" method=\"cwt\", \n",
|
||
|
|
" show=True, \n",
|
||
|
|
" show_type='all')"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"cell_type": "code",
|
||
|
|
"execution_count": 17,
|
||
|
|
"metadata": {},
|
||
|
|
"outputs": [
|
||
|
|
{
|
||
|
|
"data": {
|
||
|
|
"image/png": "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
|
||
|
|
"text/plain": [
|
||
|
|
"<Figure size 640x480 with 1 Axes>"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
"metadata": {},
|
||
|
|
"output_type": "display_data"
|
||
|
|
}
|
||
|
|
],
|
||
|
|
"source": [
|
||
|
|
"# Visualize P-peaks and T-peaks\n",
|
||
|
|
"signal_cwt, waves_cwt = nk.ecg_delineate(ecg_signal, \n",
|
||
|
|
" rpeaks, \n",
|
||
|
|
" sampling_rate=500, \n",
|
||
|
|
" method=\"cwt\", \n",
|
||
|
|
" show=True, \n",
|
||
|
|
" show_type='peaks')"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"cell_type": "code",
|
||
|
|
"execution_count": 18,
|
||
|
|
"metadata": {},
|
||
|
|
"outputs": [
|
||
|
|
{
|
||
|
|
"data": {
|
||
|
|
"image/png": "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
|
||
|
|
"text/plain": [
|
||
|
|
"<Figure size 640x480 with 1 Axes>"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
"metadata": {},
|
||
|
|
"output_type": "display_data"
|
||
|
|
}
|
||
|
|
],
|
||
|
|
"source": [
|
||
|
|
"# Visualize T-waves boundaries\n",
|
||
|
|
"signal_cwt, waves_cwt = nk.ecg_delineate(ecg_signal, \n",
|
||
|
|
" rpeaks, \n",
|
||
|
|
" sampling_rate=500, \n",
|
||
|
|
" method=\"cwt\", \n",
|
||
|
|
" show=True, \n",
|
||
|
|
" show_type='bounds_T')"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"cell_type": "code",
|
||
|
|
"execution_count": 19,
|
||
|
|
"metadata": {},
|
||
|
|
"outputs": [
|
||
|
|
{
|
||
|
|
"data": {
|
||
|
|
"image/png": "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
|
||
|
|
"text/plain": [
|
||
|
|
"<Figure size 640x480 with 1 Axes>"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
"metadata": {},
|
||
|
|
"output_type": "display_data"
|
||
|
|
}
|
||
|
|
],
|
||
|
|
"source": [
|
||
|
|
"# Visualize P-waves boundaries\n",
|
||
|
|
"signal_cwt, waves_cwt = nk.ecg_delineate(ecg_signal, \n",
|
||
|
|
" rpeaks, \n",
|
||
|
|
" sampling_rate=500, \n",
|
||
|
|
" method=\"cwt\", \n",
|
||
|
|
" show=True, \n",
|
||
|
|
" show_type='bounds_P')"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"cell_type": "code",
|
||
|
|
"execution_count": 20,
|
||
|
|
"metadata": {},
|
||
|
|
"outputs": [
|
||
|
|
{
|
||
|
|
"data": {
|
||
|
|
"image/png": "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
|
||
|
|
"text/plain": [
|
||
|
|
"<Figure size 640x480 with 1 Axes>"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
"metadata": {},
|
||
|
|
"output_type": "display_data"
|
||
|
|
}
|
||
|
|
],
|
||
|
|
"source": [
|
||
|
|
"# Visualize R-waves boundaries\n",
|
||
|
|
"signal_cwt, waves_cwt = nk.ecg_delineate(ecg_signal, \n",
|
||
|
|
" rpeaks, \n",
|
||
|
|
" sampling_rate=500, \n",
|
||
|
|
" method=\"cwt\", \n",
|
||
|
|
" show=True, \n",
|
||
|
|
" show_type='bounds_R')"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"cell_type": "code",
|
||
|
|
"execution_count": 21,
|
||
|
|
"metadata": {},
|
||
|
|
"outputs": [
|
||
|
|
{
|
||
|
|
"name": "stdout",
|
||
|
|
"output_type": "stream",
|
||
|
|
"text": [
|
||
|
|
"Learning initial signal parameters...\n",
|
||
|
|
"Failed to find 8 beats during learning.\n",
|
||
|
|
"Initializing using default parameters\n",
|
||
|
|
"Running QRS detection...\n",
|
||
|
|
"QRS detection complete.\n",
|
||
|
|
"[ 544 1114 1683 2281 2855 3452 4016 4606]\n"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"data": {
|
||
|
|
"image/png": "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
|
||
|
|
"text/plain": [
|
||
|
|
"<Figure size 1000x500 with 1 Axes>"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
"metadata": {},
|
||
|
|
"output_type": "display_data"
|
||
|
|
}
|
||
|
|
],
|
||
|
|
"source": [
|
||
|
|
"# Normalize data by setting qrs peaks to index position 0 (“X-axis normalization”)\n",
|
||
|
|
"indicies = wfdb.processing.xqrs_detect(filtered_data.p_signal[:,sig_channel],example_data.fs,0,5000)\n",
|
||
|
|
"print(indicies)\n",
|
||
|
|
"\n",
|
||
|
|
"peak_points_y = [filtered_data.p_signal[:,sig_channel][i] for i in indicies] \n",
|
||
|
|
"\n",
|
||
|
|
"plt.figure(figsize=(10, 5))\n",
|
||
|
|
"plt.plot(filtered_data.p_signal[:,sig_channel])\n",
|
||
|
|
"plt.scatter(indicies, peak_points_y, color='red', label='Peaks')\n",
|
||
|
|
"plt.xlabel('Time')\n",
|
||
|
|
"plt.ylabel('Amplitude')\n",
|
||
|
|
"plt.title('Filtered XQRS Signal with Peaks')\n",
|
||
|
|
"plt.legend()\n",
|
||
|
|
"plt.grid(True)\n",
|
||
|
|
"plt.show()"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"cell_type": "markdown",
|
||
|
|
"metadata": {},
|
||
|
|
"source": [
|
||
|
|
"## Calculate R and T Axis for one datapoint"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"cell_type": "code",
|
||
|
|
"execution_count": 22,
|
||
|
|
"metadata": {},
|
||
|
|
"outputs": [],
|
||
|
|
"source": [
|
||
|
|
"def calculate_axis(data, leads, sampling_rate=500, aVF=5, I=0):\n",
|
||
|
|
" # warnining if leads not include 0 and 5 or one lead is over 5\n",
|
||
|
|
" if not (I in leads and aVF in leads) or any([lead > aVF for lead in leads]) or len(leads) > 6:\n",
|
||
|
|
" print(\"Warning: Leads should include 0 and 5, and should not include a lead over 5\")\n",
|
||
|
|
" return None, None\n",
|
||
|
|
" # Calculate the net QRS in each lead\n",
|
||
|
|
" net_qrs = {}\n",
|
||
|
|
" net_t = {}\n",
|
||
|
|
" for lead in leads:\n",
|
||
|
|
" # get data and peaks\n",
|
||
|
|
" ecg_signal = data.p_signal[:,lead]\n",
|
||
|
|
" signals, info = nk.ecg_process(ecg_signal, sampling_rate=500)\n",
|
||
|
|
" # r axis\n",
|
||
|
|
" # get amplitude of peaks\n",
|
||
|
|
" q_peaks = [ecg_signal[int(i)] for i in info['ECG_Q_Peaks'] if not math.isnan(i)]\n",
|
||
|
|
" s_peaks = [ecg_signal[int(i)] for i in info['ECG_S_Peaks'] if not math.isnan(i)]\n",
|
||
|
|
" _, rpeaks_idx = nk.ecg_peaks(ecg_signal, sampling_rate=sampling_rate)\n",
|
||
|
|
" rpeaks_idx = rpeaks_idx['ECG_R_Peaks']\n",
|
||
|
|
" r_peaks = [ecg_signal[int(i)] for i in rpeaks_idx if not math.isnan(i)]\n",
|
||
|
|
" # calculate avg peal amplitude\n",
|
||
|
|
" q_peaks_avg = np.mean(q_peaks) if q_peaks else 0\n",
|
||
|
|
" s_peaks_avg = np.mean(s_peaks) if s_peaks else 0\n",
|
||
|
|
" r_peaks_avg = np.mean(r_peaks) if r_peaks else 0\n",
|
||
|
|
" # Calculate net QRS in lead\n",
|
||
|
|
" net_qrs[lead] = r_peaks_avg - (q_peaks_avg + s_peaks_avg)\n",
|
||
|
|
"\n",
|
||
|
|
" # T axis\n",
|
||
|
|
" t_peaks = [ecg_signal[int(i)] for i in info['ECG_T_Peaks'] if not math.isnan(i)]\n",
|
||
|
|
" net_t[lead] = np.mean(t_peaks) if t_peaks else 0\n",
|
||
|
|
"\n",
|
||
|
|
" print(net_qrs.get(aVF, 0), net_qrs.get(I, 0))\n",
|
||
|
|
" # Calculate the R axis (Convert to degrees)\n",
|
||
|
|
" r_axis = np.arctan2(net_qrs.get(aVF, 0), net_qrs.get(I, 0)) * (180 / np.pi)\n",
|
||
|
|
"\n",
|
||
|
|
" # Calculate the T axis (Convert to degrees)\n",
|
||
|
|
" t_axis = np.arctan2(net_t.get(aVF, 0), net_t.get(I, 0)) * (180 / np.pi)\n",
|
||
|
|
" \n",
|
||
|
|
" return r_axis, t_axis\n",
|
||
|
|
"\n",
|
||
|
|
"\n",
|
||
|
|
"\n"
|
||
|
|
]
|
||
|
|
},
|
||
|
|
{
|
||
|
|
"cell_type": "code",
|
||
|
|
"execution_count": 23,
|
||
|
|
"metadata": {},
|
||
|
|
"outputs": [
|
||
|
|
{
|
||
|
|
"name": "stdout",
|
||
|
|
"output_type": "stream",
|
||
|
|
"text": [
|
||
|
|
"0.8047692058411333 0.5260930603345693\n",
|
||
|
|
"2 lead R Axis: 56.83 degrees\n",
|
||
|
|
"2 lead T Axis: 30.78 degrees\n",
|
||
|
|
"\n"
|
||
|
|
]
|
||
|
|
}
|
||
|
|
],
|
||
|
|
"source": [
|
||
|
|
"# print(data_org['SB'][0].__dict__) 'sig_name': ['I', 'II', 'III', 'aVR', 'aVL', 'aVF', 'V1', 'V2', 'V3', 'V4', 'V5', 'V6']\n",
|
||
|
|
"\n",
|
||
|
|
"i_sig = 0\n",
|
||
|
|
"avf = 5\n",
|
||
|
|
"sampling_rate = 500\n",
|
||
|
|
"\n",
|
||
|
|
"example_data = data_org['SB'][0]\n",
|
||
|
|
"filtered_data = data_helper.filter_data(example_data, filter_params)\n",
|
||
|
|
"\n",
|
||
|
|
"\n",
|
||
|
|
"r_ax, t_ax = calculate_axis(filtered_data, [0, 5], sampling_rate=500)\n",
|
||
|
|
"print(f\"2 lead R Axis: {r_ax:.2f} degrees\")\n",
|
||
|
|
"print(f\"2 lead T Axis: {t_ax:.2f} degrees\")\n",
|
||
|
|
"print(\"\")\n"
|
||
|
|
]
|
||
|
|
}
|
||
|
|
],
|
||
|
|
"metadata": {
|
||
|
|
"kernelspec": {
|
||
|
|
"display_name": "Python 3",
|
||
|
|
"language": "python",
|
||
|
|
"name": "python3"
|
||
|
|
},
|
||
|
|
"language_info": {
|
||
|
|
"codemirror_mode": {
|
||
|
|
"name": "ipython",
|
||
|
|
"version": 3
|
||
|
|
},
|
||
|
|
"file_extension": ".py",
|
||
|
|
"mimetype": "text/x-python",
|
||
|
|
"name": "python",
|
||
|
|
"nbconvert_exporter": "python",
|
||
|
|
"pygments_lexer": "ipython3",
|
||
|
|
"version": "3.10.4"
|
||
|
|
}
|
||
|
|
},
|
||
|
|
"nbformat": 4,
|
||
|
|
"nbformat_minor": 2
|
||
|
|
}
|